Biological and Biomedical Sciences Graduate Program

Publications  

 

Publications & Presentations


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publications

BBS Student Publications and Presentations

Biological and Biomedical Sciences
Graduate Student Publications and Presentations (graduate students bolded)
April 2013 – April 2014

Adisetiyo H, Liang M, Liao CP, Aycock-Williams A, Cohen MB, Xu S, Neamati N, Conway EM, Cheng CY, Nikitin AY, Roy-Burman P. Loss of survivin in the prostate epithelium impedes carcinogenesis in a mouse model of prostate adenocarcinoma. PLoS One. 2013 Jul 31; 8(7): e69484. PMCID: PMC3729965.

Adisetiyo, H., Liang, M., Liao, C.P., Aycock-Williams, A., Cohen, M.B., Xu, S., Neamati, N., Conway, E.M., Cheng, C.Y., Nikitin, A.Y., and Roy-Burman, P. Loss of survivin in the prostate epithelium impedes carcinogenesis in a mouse model of prostate adenocarcinoma. PLoS One. 2013 Jul 31; 8(7): e69484. PMCID: PMC3729965.

Ahmed AH, Ptak CP, Fenwick MK, Hsieh CL, Weiland GA, Oswald RE. Dynamics of cleft closure of the GluA2 ligand-binding domain in the presence of full and partial agonists revealed by hydrogen-deuterium exchange. J Biol Chem. 2013 Sep 20; 288(38): 27658-27666. PMCID: PMC3779761.

Annaluru N, Muller H, Mitchell LA, Ramalingam S, Stracquadanio G, Richardson SM, Dymond JS, Kuang Z, Scheifele LZ, Cooper EM, Cai Y, Zeller K, Agmon N, Han JS, Hadjithomas M, Tullman J, Caravelli K, Cirelli K, Guo Z, London V, Yeluru A, Murugan S, Kandavelou K, Agier N, Fischer G, Yang K, Martin JA, Bilgel M, Bohutski P, Boulier KM, Capaldo BJ, Chang J, Charoen K, Choi WJ, Deng P, Dicarlo JE, Doong J, Dunn J, Feinberg JI, Fernandez C, Floria CE, Gladowski D, Hadidi P, Ishizuka I, Jabbari J, Lau CY, Lee PA, Li S, Lin D, Linder ME, Ling J, Liu J, Liu J, London M, Ma H, Mao J, McDade JE, McMillan A, Moore AM, Oh WC, Ouyang Y, Patel R, Paul M, Paulsen LC, Qiu J, Rhee A, Rubashkin MG, Soh IY, Sotuyo NE, Srinivas V, Suarez A, Wong A, Wong R, Xie WR, Xu Y, Yu AT, Koszul R, Bader JS, Boeke JD, Chandrasegaran S. Total synthesis of a functional designer eukaryotic chromosome. Science. 2014 Mar 27.

Auton A, Rui Li Y, Kidd J, Oliveira K, Nadel J, Holloway JK, Hayward JJ, Cohen PE, Greally JM, Wang J, Bustamante CD, Boyko AR. Genetic recombination is targeted towards gene promoter regions in dogs. PLoS Genet. 2013 Dec; 9(12): e1003984. PMCID: PMC3861134.

Bicalho RC, Foditsch C, Gilbert R, Oikonomou G. The effect of sire predicted transmitting ability for production traits on fertility, survivability, and health of holstein dairy cows. Theriogenology. 2013 Oct 16.

Blank BS, Abi Abdallah DS, Park JJ, Nazarova EV, Bitar AP, Maurer KJ, Marquis H. Misregulation of the broad-range phospholipase C activity increases the susceptibility of listeria monocytogenes to intracellular killing by neutrophils. Microbes Infect. 2013 Oct 25.

Bolcun-Filas E, Rinaldi VD, White ME, Schimenti JC. Reversal of female infertility by Chk2 ablation reveals the oocyte DNA damage checkpoint pathway. Science. 2014 Jan 31; 343(6170): 533-536.

Bolcun-Filas E, Rinaldi VD, White ME, Schimenti JC. Reversal of female infertility by Chk2 ablation reveals the oocyte DNA damage checkpoint pathway. Science. 2014 Jan 31; 343(6170): 533-536. 

Briggs KR, Yaros JP, Liotta JL, Lucio-Forster A, Lee AC, Bowman DD. Detecting aelurostrongylus abstrusus-specific IgG antibody using an immunofluorescence assay. J Feline Med Surg. 2013 May 24.

Brooks MB, Divers TJ, Watts AE, Ness SL, Frye AH, Stokol T, Fubini SL. Effects of clopidogrel on the platelet activation response in horses. Am J Vet Res. 2013 Sep; 74(9): 1212-1222.

Cancer Genome Atlas Research Network, Genome Characterization Center, Chang K, Creighton CJ, Davis C, Donehower L, Drummond J, Wheeler D, Ally A, Balasundaram M, Birol I, Butterfield YS, Chu A, Chuah E, Chun HJ, Dhalla N, Guin R, Hirst M, Hirst C, Holt RA, Jones SJ, Lee D, Li HI, Marra MA, Mayo M, Moore RA, Mungall AJ, Robertson AG, Schein JE, Sipahimalani P, Tam A, Thiessen N, Varhol RJ, Beroukhim R, Bhatt AS, Brooks AN, Cherniack AD, Freeman SS, Gabriel SB, Helman E, Jung J, Meyerson M, Ojesina AI, Pedamallu CS, Saksena G, Schumacher SE, Tabak B, Zack T, Lander ES, Bristow CA, Hadjipanayis A, Haseley P, Kucherlapati R, Lee S, Lee E, Luquette LJ, Mahadeshwar HS, Pantazi A, Parfenov M, Park PJ, Protopopov A, Ren X, Santoso N, Seidman J, Seth S, Song X, Tang J, Xi R, Xu AW, Yang L, Zeng D, Auman JT, Balu S, Buda E, Fan C, Hoadley KA, Jones CD, Meng S, Mieczkowski PA, Parker JS, Perou CM, Roach J, Shi Y, Silva GO, Tan D, Veluvolu U, Waring S, Wilkerson MD, Wu J, Zhao W, Bodenheimer T, Hayes DN, Hoyle AP, Jeffreys SR, Mose LE, Simons JV, Soloway MG, Baylin SB, Berman BP, Bootwalla MS, Danilova L, Herman JG, Hinoue T, Laird PW, Rhie SK, Shen H, Triche T, Weisenberger DJ, Carter SL, Cibulskis K, Chin L, Zhang J, Getz G, Sougnez C, Wang M, Genome Data Analysis Center, Saksena G, Carter SL, Cibulskis K, Chin L, Zhang J, Getz G, Dinh H, Doddapaneni HV, Gibbs R, Gunaratne P, Han Y, Kalra D, Kovar C, Lewis L, Morgan M, Morton D, Muzny D, Reid J, Xi L, Cho J, Dicara D, Frazer S, Gehlenborg N, Heiman DI, Kim J, Lawrence MS, Lin P, Liu Y, Noble MS, Stojanov P, Voet D, Zhang H, Zou L, Stewart C, Bernard B, Bressler R, Eakin A, Iype L, Knijnenburg T, Kramer R, Kreisberg R, Leinonen K, Lin J, Liu Y, Miller M, Reynolds SM, Rovira H, Shmulevich I, Thorsson V, Yang D, Zhang W, Amin S, Wu CJ, Wu CC, Akbani R, Aldape K, Baggerly KA, Broom B, Casasent TD, Cleland J, Creighton C, Dodda D, Edgerton M, Han L, Herbrich SM, Ju Z, Kim H, Lerner S, Li J, Liang H, Liu W, Lorenzi PL, Lu Y, Melott J, Mills GB, Nguyen L, Su X, Verhaak R, Wang W, Weinstein JN, Wong A, Yang Y, Yao J, Yao R, Yoshihara K, Yuan Y, Yung AK, Zhang N, Zheng S, Ryan M, Kane DW, Aksoy BA, Ciriello G, Dresdner G, Gao J, Gross B, Jacobsen A, Kahles A, Ladanyi M, Lee W, Lehmann KV, Miller ML, Ramirez R, Ratsch G, Reva B, Sander C, Schultz N, Senbabaoglu Y, Shen R, Sinha R, Sumer SO, Sun Y, Taylor BS, Weinhold N, Fei S, Spellman P, Benz C, Carlin D, Cline M, Craft B, Ellrott K, Goldman M, Haussler D, Ma S, Ng S, Paull E, Radenbaugh A, Salama S, Sokolov A, Stuart JM, Swatloski T, Uzunangelov V, Waltman P, Yau C, Zhu J, Hamilton SR, Sequencing Center, Getz G, Sougnez C, Abbott S, Abbott R, Dees ND, Delehaunty K, Ding L, Dooling DJ, Eldred JM, Fronick CC, Fulton R, Fulton LL, Kalicki-Veizer J, Kanchi KL, Kandoth C, Koboldt DC, Larson DE, Ley TJ, Lin L, Lu C, Magrini VJ, Mardis ER, McLellan MD, McMichael JF, Miller CA, O'Laughlin M, Pohl C, Schmidt H, Smith SM, Walker J, Wallis JW, Wendl MC, Wilson RK, Wylie T, Zhang Q, Data Coordinating Center, Burton R, Jensen MA, Kahn A, Pihl T, Pot D, Wan Y, Tissue Source Site, Levine DA, Biospecimen Core Resource Center, Black AD, Bowen J, Frick J, Gastier-Foster JM, Harper HA, Helsel C, Leraas KM, Lichtenberg TM, McAllister C, Ramirez NC, Sharpe S, Wise L, Zmuda E, National Cancer Institute/National Human Genome Research Institute Project Team, Chanock SJ, Davidsen T, Demchok JA, Eley G, Felau I, Ozenberger BA, Sheth M, Sofia H, Staudt L, Tarnuzzer R, Wang Z, Yang L, Zhang J, Collaborators, Omberg L, Margolin A, Raphael BJ, Vandin F, Wu HT, Leiserson MD, Benz SC, Vaske CJ, Noushmehr H, Knijnenburg T, Wolf D, Veer LV, Collisson EA, Anastassiou D, Ou Yang TH, Lopez-Bigas N, Gonzalez-Perez A, Tamborero D, Xia Z, Li W, Cho DY, Przytycka T, Hamilton M, McGuire S, Nelander S, Johansson P, Jornsten R, Kling T, Sanchez J, Weinstein JN, Collisson EA, Mills GB, Shaw KR, Ozenberger BA, Ellrott K, Shmulevich I, Sander C, Stuart JM. The cancer genome atlas pan-cancer analysis project. Nat Genet. 2013 Sep 26; 45(10): 1113-1120.

Cheng CY, Hwang CI, Corney DC, Flesken-Nikitin A, Jiang L, Oner GM, Munroe RJ, Schimenti JC, Hermeking H, Nikitin AY. miR-34 cooperates with p53 in suppression of prostate cancer by joint regulation of stem cell compartment. Cell Rep. 2014 Mar 12. 

Cheng CY, Zhou Z, Nikitin AY. Detection and organ-specific ablation of neuroendocrine cells by synaptophysin locus-based BAC cassette in transgenic mice. PLoS One. 2013 Apr 22; 8(4): e60905. PMCID: PMC3632533.

Clark PA, Xie J, Li S, Zhang X, Coonrod S, Roberson MS. Matrix metalloproteinase 9 is a distal-less 3 target-gene in placental trophoblast cells. Am J Physiol Cell Physiol. 2013 Jul 15; 305(2): C173-81. PMCID: PMC3725627.

Cleary SP, Jeck WR, Zhao X, Kuichen, Selitsky SR, Savich GL, Tan TX, Wu MC, Getz G, Lawrence MS, Parker JS, Li J, Powers S, Kim H, Fischer S, Giundi M, Ghanekar A, Chiang DY. Identification of driver genes in hepatocellular carcinoma by exome sequencing. Hepatology. 2013 May 31.

Cohen SB, Maurer KJ, Egan CE, Oghumu S, Satoskar AR, Denkers EY. CXCR3-dependent CD4 T cells are required to activate inflammatory monocytes for defense against intestinal infection. PLoS Pathog. 2013 Oct; 9(10): e1003706.

Congleton, J., Shen, M., Macdonald, R., Malavasi, F., Yen, A. Phosphorylation of c-cbl and p85 PI3K driven by all-trans retinoic acid and CD38 depends on lyn kinase activity. Cell Signal. 2014 Mar 29.

Dayton WR, White ME. Role of satellite cells in anabolic steroid-induced muscle growth in feedlot steers. J Anim Sci. 2013 Oct 28.

Fortune JE, Yang MY, Allen JJ, Herrick SL. The ovarian follicular reserve in cattle: What regulates its formation and size? J Anim Sci. 2013 Jun 4.

Fortune JE, Yang MY, Allen JJ, Herrick SL. Triennial reproduction symposium: The ovarian follicular reserve in cattle: What regulates its formation and size? J Anim Sci. 2013 Jul; 91(7): 3041-3050.

Freedman AH, Gronau I, Schweizer RM, Ortega-Del Vecchyo D, Han E, Silva PM, Galaverni M, Fan Z, Marx P, Lorente-Galdos B, Beale H, Ramirez O, Hormozdiari F, Alkan C, Vila C, Squire K, Geffen E, Kusak J, Boyko AR, Parker HG, Lee C, Tadigotla V, Siepel A, Bustamante CD, Harkins TT, Nelson SF, Ostrander EA, Marques-Bonet T, Wayne RK, Novembre J. Genome sequencing highlights the dynamic early history of dogs. PLoS Genet. 2014 Jan; 10(1): e1004016. PMCID: PMC3894170.

Getchell RG, Cornwell ER, Groocock GH, Wong PT, Coffee LL, Wooster GA, Bowser PR. Experimental transmission of VHSV genotype IVb by predation. J Aquat Anim Health. 2013 Dec; 25(4): 221-229.

Getchell, R.G., Cornwell, E.R., Groocock, G.H., Wong, P.T., Coffee, L.L., Wooster, G.A., and Bowser, P.R. Experimental transmission of VHSV genotype IVb by predation. J Aquat Anim Health. 2013 Dec; 25(4): 221-229.

Goldstein O, Jordan JA, Aguirre GD, Acland GM. A non-stop S-antigen gene mutation is associated with late onset hereditary retinal degeneration in dogs. Mol Vis. 2013 Aug 27; 19: 1871-1884. PMCID: PMC3762564.

Goldstein O, Mezey JG, Schweitzer PA, Boyko AR, Gao C, Bustamante CD, Jordan JA, Aguirre GD, Acland GM. IQCB1 and PDE6B mutations cause similar early onset retinal degenerations in two closely related terrier dog breeds. Invest Ophthalmol Vis Sci. 2013 Oct 25; 54(10): 7005-7019. PMCID: PMC3809947.

Grodio JL, Ley DH, Schat KA, Hawley DM. Chronic mycoplasma conjunctivitis in house finches: Host antibody response and M. gallisepticum VlhA expression. Vet Immunol Immunopathol. 2013 May 20.

Hart JC, Burton AJ, Pinn TL, Fubini SL, Dawson DR. Spiral colon impaction in juvenile alpacas: 12 cases (2006-2010). J Am Vet Med Assoc. 2013 May 15; 242(10): 1419-1424.

Hilgemann DW, Fine M, Linder ME, Jennings BC, Lin MJ. Massive endocytosis triggered by surface membrane palmitoylation under mitochondrial control in BHK fibroblasts. Elife. 2013 Nov 26; 2(0): 10.7554/eLife.01293. PMCID: PMC3839538.

Huang W, August A. Editorial: Jack of all trades? The versatility of IL-4 in CD8+ T cell polarity. J Leukoc Biol. 2013 Dec; 94(6): 1097-1099.

Huang W, Morales JL, Gazivoda VP, Lai J, Qi Q, August A. The zinc-binding region of IL-2 inducible T cell kinase (itk) is required for interaction with Galpha13 and activation of serum response factor. Int J Biochem Cell Biol. 2013 Jun; 45(6): 1074-1082.  

Jin Y, Liu Y, Lin Q, Li J, Druso JE, Antonyak MA, Meininger CJ, Zhang SL, Dostal DE, Guan JL, Cerione RA, Peng X. Deletion of Cdc42 enhances ADAM17-mediated vascular endothelial growth factor receptor 2 shedding and impairs vascular endothelial cell survival and vasculogenesis. Mol Cell Biol. 2013 Nov; 33(21): 4181-4197. PMCID: PMC3811890.

Kannan AK, Sahu N, Mohanan S, Mohinta S, August A. IL-2-inducible T-cell kinase modulates TH2-mediated allergic airway inflammation by suppressing IFN-gamma in naive CD4+ T cells. J Allergy Clin Immunol. 2013 Oct; 132(4): 811-20.e1-5.

Kim KM, Kim HS, Lim SH, Cheong SH, Choi EJ, Kang H, Choi HR, Jeon JW, Yon JH, Oh M, Shin JG. Effects of genetic polymorphisms of OPRM1, ABCB1, CYP3A4/5 on postoperative fentanyl consumption in korean gynecologic patients. Int J Clin Pharmacol Ther. 2013 May; 51(5): 383-392.

Kiso WK, Selvaraj V, Nagashima J, Asano A, Brown JL, Schmitt DL, Leszyk J, Travis AJ, Pukazhenthi BS. Lactotransferrin in asian elephant (elephas maximus) seminal plasma correlates with semen quality. PLoS One. 2013 Aug 16; 8(8): e71033. PMCID: PMC3745378.

Kiso, W.K., Selvaraj, V., Nagashima, J., Asano, A., Brown, J.L., Schmitt, D.L., Leszyk, J., Travis, A.J., and Pukazhenthi, B.S. Lactotransferrin in asian elephant (elephas maximus) seminal plasma correlates with semen quality. PLoS One. 2013 Aug 16; 8(8): e71033. PMCID: PMC3745378.

Kudva AK, Kaushal N, Mohinta S, Kennett MJ, August A, Paulson RF, Prabhu KS. Evaluation of the stability, bioavailability, and hypersensitivity of the omega-3 derived anti-leukemic prostaglandin: Delta(12)-prostaglandin j3. PLoS One. 2013 Dec 2; 8(12): e80622. PMCID: PMC3846793.

Labare MP, Soohoo H, Kim D, Tsoi K, Liotta JL, Bowman DD. Ineffectiveness of a quaternary ammonium salt and povidone-iodine for the inactivation of ascaris suum eggs. Am J Infect Control. 2013 Apr; 41(4): 360-361.

Lacko, L.A., Massimiani, M., Sones, J.L., Hurtado, R., Salvi, S., Ferrazzani, S., Davisson, R.L., Campagnolo, L., and Stuhlmann, H. Novel expression of EGFL7 in placental trophoblast and endothelial cells and its implication in preeclampsia. Mech Dev. 2014 Apr 18.

Lee JH, Kim J, Gludish D, Roach R, Saunders AH, Barrios J, Woo AJ, Chen H, Conner D, Fujiwara Y, Stripp B, Kim C. SPC H2B-GFP mice reveal heterogeneity of surfactant protein C-expressing lung cells. American Journal of Respiratory Cell and Molecular Biology (In press).

Li M, Jirapatnakul A, Biancardi A, Riccio ML, Weiss RS, Reeves AP. Growth pattern analysis of murine lung neoplasms by advanced semi-automated quantification of micro-CT images. PLoS One. 2013 Dec 23; 8(12): e83806.

Li XZ, Roy CK, Dong X, Bolcun-Filas E, Wang J, Han BW, Xu J, Moore MJ, Schimenti JC, Weng Z, Zamore PD. An ancient transcription factor initiates the burst of piRNA production during early meiosis in mouse testes. Mol Cell. 2013 Apr 11; 50(1): 67-81. PMCID: PMC3671569.

Li Y, Vonholdt BM, Reynolds A, Boyko AR, Wayne RK, Wu DD, Zhang YP. Artificial selection on brain expressed genes during the domestication of dog. Mol Biol Evol. 2013 May 8.

Li Y, Vonholdt BM, Reynolds A, Boyko AR, Wayne RK, Wu DD, Zhang YP. Artificial selection on brain-expressed genes during the domestication of dog. Mol Biol Evol. 2013 Aug; 30(8): 1867-1876.

Li Y, Wu DD, Boyko AR, Wang GD, Wu SF, Irwin DM, Zhang YP. Population variation revealed high altitude adaptation of tibetan mastiffs. Mol Biol Evol. 2014 Feb 11.

Licitra BN, Millet JK, Regan AD, Hamilton BS, Rinaldi VD, Duhamel GE, Whittaker GR. Mutation in spike protein cleavage site and pathogenesis of feline coronavirus. Emerg Infect Dis. 2013 Jul; 19(7): 1066-1073. PMCID: PMC3713968.

Lopez J, Gorgi AA, Lucio-Forster A, Lee ACY, Bowman DD. Suspected neurocysticercosis as the cause of seizures in a German shepherd dog.

Lyndaker AM, Lim PX, Mleczko JM, Diggins CE, Holloway JK, Holmes RJ, Kan R, Schlafer DH, Freire R, Cohen PE, Weiss RS. Conditional inactivation of the DNA damage response gene Hus1 in mouse testis reveals separable roles for components of the RAD9-RAD1-HUS1 complex in meiotic chromosome maintenance. PLoS Genet. 2013; 9(2): e1003320. PMCID: PMC3585019.

Machado VS, Bicalho ML, Meira Junior EB, Rossi R, Ribeiro BL, Lima S, Santos T, Kussler A, Foditsch C, Ganda EK, Oikonomou G, Cheong SH, Gilbert RO, Bicalho RC. Subcutaneous immunization with inactivated bacterial components and purified protein of escherichia coli, fusobacterium necrophorum and trueperella pyogenes prevents puerperal metritis in holstein dairy cows. PLoS One. 2014 Mar 17; 9(3): e91734. PMCID: PMC3956715.

Machado VS, Bicalho ML, Pereira RV, Caixeta LS, Knauer WA, Oikonomou G, Gilbert RO, Bicalho RC. Effect of an injectable trace mineral supplement containing selenium, copper, zinc, and manganese on the health and production of lactating holstein cows. Vet J. 2013 Apr 15.

Machado VS, Bicalho ML, Pereira RV, Caixeta LS, Knauer WA, Oikonomou G, Gilbert RO, Bicalho RC. Effect of an injectable trace mineral supplement containing selenium, copper, zinc, and manganese on the health and production of lactating holstein cows. Vet J. 2013 Aug; 197(2): 451-456.

Machado, V.S., and Bicalho, R.C. Complete genome sequence of trueperella pyogenes, an important opportunistic pathogen of livestock. Genome Announc. 2014 May 1; 2(2): 10.1128/genomeA.00400-14.

Machado, V.S., Oikonomou, G., Lima, S.F., Bicalho, M.L., Kacar, C., Foditsch, C., Felippe, M.J., Gilbert, R.O., and Bicalho, R.C. The effect of injectable trace minerals (selenium, copper, zinc, and manganese) on peripheral blood leukocyte activity and serum superoxide dismutase

Martinez MG, Bialecki MA, Belouzard S, Cordo SM, Candurra NA, Whittaker GR. Utilization of human DC-SIGN and L-SIGN for entry and infection of host cells by the new world arenavirus, junin virus. Biochem Biophys Res Commun. 2013 Oct 29.

Martinez MG, Bialecki MA, Belouzard S, Cordo SM, Candurra NA, Whittaker GR. Utilization of human DC-SIGN and L-SIGN for entry and infection of host cells by the new world arenavirus, junin virus. Biochem Biophys Res Commun. 2013 Nov 22; 441(3): 612-617. 

Mohanan S, Horibata S, McElwee JL, Dannenberg AJ, Coonrod SA. Identification of macrophage extracellular trap-like structures in mammary gland adipose tissue: A preliminary study. Front Immunol. 2013; 4: 67. PMCID: PMC3600535.

Moller M, Nielsen SS, Ramachandran S, Li Y, Tria G, Streicher W, Petoukhov MV, Cerione RA, Gillilan RE, Vestergaard B. Small angle x-ray scattering studies of mitochondrial glutaminase C reveal extended flexible regions, and link oligomeric state with enzyme activity. PLoS One. 2013 Sep 30; 8(9): e74783. PMCID: PMC3787022.

Montgomery K, Ortved K, DeVries J, Hackett R, Kern T, Irby N, Ducharme N. Bilateral parotid duct transposition for keratoconjunctivitis sicca in a connemara stallion. Vet Ophthalmol. 2013 Jul; 16(4): 303-311. 

Novakofski KD, Williams RM, Fortier LA, Mohammed HO, Zipfel WR, Bonassar LJ. Identification of cartilage injury using quantitative multiphoton microscopy. Osteoarthritis Cartilage. 2013 Oct 31.

Oikonomou G, Banos G, Machado V, Caixeta L, Bicalho RC. Short communication: Genetic characterization of digital cushion thickness. J Dairy Sci. 2013 Nov 13. 

Oikonomou G, Bicalho ML, Meira E, Rossi RE, Foditsch C, Machado VS, Teixeira AG, Santisteban C, Schukken YH, Bicalho RC. Microbiota of cow's milk; distinguishing healthy, sub-clinically and clinically diseased quarters. PLoS One. 2014 Jan 20; 9(1): e85904.

Oikonomou G, Teixeira AG, Foditsch C, Bicalho ML, Machado VS, Bicalho RC. Fecal microbial diversity in pre-weaned dairy calves as described by pyrosequencing of metagenomic 16S rDNA. associations of faecalibacterium species with health and growth. PLoS One. 2013 Apr 30; 8(4): e63157. PMCID: PMC3639981.

Ortved, K.F., Stewart, A.W., Fubini, S.L., and Hackett, R.P. Surgical treatment of 4 horses for cryptorchidism caused by failure of regression of the cranial suspensory ligament of the testis. Vet Surg. 2014 Feb 11.

Park J, Long DT, Lee KY, Abbas T, Shibata E, Negishi M, Luo Y, Schimenti JC, Gambus A, Walter JC, Dutta A. The MCM8-MCM9 complex promotes RAD51 recruitment at DNA damage sites to facilitate homologous recombination. Mol Cell Biol. 2013 Apr; 33(8): 1632-1644. PMCID: PMC3624244.

Peng X, Lin Q, Liu Y, Jin Y, Druso JE, Antonyak MA, Guan JL, Cerione RA. Erratum to: Inactivation of Cdc42 in embryonic brain results in hydrocephalus with ependymal cell defects in mice. Protein Cell. 2013 Aug; 4(8): 641-013-0804-3.

Pereira RV, Bicalho ML, Machado VS, Lima S, Teixeira AG, Warnick LD, Bicalho RC. Evaluation of the effects of ultraviolet light on bacterial contaminants inoculated into whole milk and colostrum, and on colostrum immunoglobulin G. J Dairy Sci. 2014 Feb 26. 

Pereira RV, Caixeta LS, Giordano JO, Guard CL, Bicalho RC. Reproductive performance of dairy cows resynchronized after pregnancy diagnosis at 31 (+/-3 days) after artificial insemination (AI) compared with resynchronization at 31 (+/-3 days) after AI with pregnancy diagnosis at 38 (+/-3 days) after AI. J Dairy Sci. 2013 Oct 3.

Pereira RV, Siler JD, Bicalho RC, Warnick LD. Multiresidue screening of milk withheld for sale at dairy farms in central new york state. J Dairy Sci. 2014 Jan 16.

Podinovskaia M, Lee W, Caldwell S, Russell DG. Infection of macrophages with mycobacterium tuberculosis induces global modifications to phagosomal function. Cell Microbiol. 2013 Jun; 15(6): 843-859. PMCID: PMC3620910.

Ptak CP, Hsieh CL, Weiland GA, Oswald RE. Role of stoichiometry in the dimer-stabilizing effect of AMPA receptor allosteric modulators. ACS Chem Biol. 2013 Oct 23.

Raman R, Ptak CP, Hsieh CL, Oswald RE, Chang YF, Sharma Y. The perturbation of tryptophan fluorescence by phenylalanine to alanine mutations identifies the hydrophobic core in a subset of bacterial ig-like domains. Biochemistry. 2013 Jul 9; 52(27): 4589-4591.

Reesink HL, Hermanson JW, Cheetham J, Mu L, Mitchell LM, Soderholm LV, Ducharme NG. Anatomic and neuromuscular characterisation of the equine cricothyroid muscle. Equine Vet J. 2013 Sep; 45(5): 630-636.

Reesink HL, Hermanson JW, Cheetham J, Mu L, Mitchell LM, Soderholm LV, Ducharme NG. Anatomic and neuromuscular characterisation of the equine cricothyroid muscle. Equine Vet J. 2013 Sep; 45(5): 630-636.

Rimbault M, Beale HC, Schoenebeck JJ, Hoopes BC, Allen JJ, Kilroy-Glynn P, Wayne RK, Sutter NB, Ostrander EA. Derived variants at six genes explain nearly half of size reduction in dog breeds. Genome Res. 2013 Sep 11.

Ruby R, Buckles E, Pinn T, Ness SA, Yeager AE, Ainsworth DM. Transdiaphragmatic hepatic and pulmonary abscess attributed to ileal diverticulitis in a horse. J Vet Intern Med. 2013 Oct 1.

Schnabel LV, Maza PS, Williams KM, Irby NL, McDaniel CM, Collins BG. Use of a formal assessment instrument for evaluation of veterinary student surgical skills. Vet Surg. 2013 Apr 12.

Schnabel, L.V., Abratte, C.M., Schimenti, J.C., Felippe, M.J., Cassano, J.M., Southard, T.L., Cross, J.A., Fortier, L.A. Induced pluripotent stem cells have similar immunogenic and more potent immunomodulatory properties compared with bone marrow-derived stromal cells in vitro. Regen Med. 2014 Apr 28.

Schneider AG, Abi Abdallah DS, Butcher BA, Denkers EY. Toxoplasma gondii triggers phosphorylation and nuclear translocation of dendritic cell STAT1 while simultaneously blocking IFNgamma-induced STAT1 transcriptional activity. PLoS One. 2013; 8(3): e60215. PMCID: PMC3603897.

Stadler SC, Vincent CT, Fedorov VD, Patsialou A, Cherrington BD, Wakshlag JJ, Mohanan S, Zee BM, Zhang X, Garcia BA, Condeelis JS, Brown AM, Coonrod SA, Allis CD. Dysregulation of PAD4-mediated citrullination of nuclear GSK3beta activates TGF-beta signaling and induces epithelial-to-mesenchymal transition in breast cancer cells. Proc Natl Acad Sci U S A. 2013 Jul 16; 110(29): 11851-11856. PMCID: PMC3718105.

Teixeira AG, Bicalho ML, Machado VS, Oikonomou G, Kacar C, Foditsch C, Young R, Knauer WA, Nydam DV, Bicalho RC. Heat and ultraviolet light treatment of colostrum and hospital milk: Effects on colostrum and hospital milk characteristics and calf health and growth parameters. Vet J. 2013 Aug; 197(2): 175-181.

Tse LV, Hamilton AM, Friling T, Whittaker GR. A novel activation mechanism of avian influenza virus H9N2 by furin. J Virol. 2013 Nov 20.

Tse LV, Marcano VC, Huang W, Pocwierz MS, Whittaker GR. Plasmin-mediated activation of pandemic H1N1 influenza virus hemagglutinin is independent of the viral neuraminidase. J Virol. 2013 May; 87(9): 5161-5169. PMCID: PMC3624321.

Welsh IC, Thomsen M, Gludish DW, Alfonso-Parra C, Bai Y, Martin JF, Kurpios NA. Integration of left-right Pitx2 transcription and wnt signaling drives asymmetric gut morphogenesis via Daam2. Dev Cell. 2013 Sep 30; 26(6): 629-644.

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